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Gluten-Free Bakery in New York

Gluten-Free Bakery in New York

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 on 2025.08.31
8 Places
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A handpicked mix of dedicated gluten-free bakeries—iconic hits and fresh finds—verified as open and locally rooted. From bagels to Japanese sandos and vegan bakes, this list spans neighborhoods and flavors. Go early; favorites sell out.

Modern Bread and Bagel

Bakery · Upper West Side

Hand‑rolled, kettle‑boiled, entirely gluten‑free bagels with a bakery case of babka, cookies, and rugelach. Featured by New York Jewish Week and praised by bagel obsessives. Weekend lines form fast—order ahead or arrive early.

https://www.modernbreadandbagel.com/
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By the Way Bakery

Bakery · Upper East Side

Beloved neighborhood bakery turning out rugelach, challah, biscotti, and elegant layer cakes—gluten‑free and dairy‑free. Included by Eater New York among notable Jewish bakeries. Small shop, big flavors; Friday challah sells fast.

https://ny.eater.com/maps/best-babka-rugelach-jewish-bakeries-nyc

Senza Gluten by Jemiko - 100% Gluten Free Cafe & Bakery

Cafe · Greenwich Village

The bakery arm of the long‑running gluten‑free restaurant: éclairs, tiramisu, breads, and espresso in a compact café. Consistently loved by celiac diners and a perfect pre‑ or post‑meal stop near its sibling restaurant.

https://senzaglutenbyjemiko.com/

Sixteen Mill Bakeshop

Bakery · Gowanus

Gowanus bakery specializing in vegan, gluten‑free, refined‑sugar‑free bakes—babka muffins, savory scones, excellent sourdough. Recognized by Condé Nast Traveler among NYC’s best bakeries. Go early; the case empties quickly.

https://www.cntraveler.com/story/best-bakeries-nyc

Sensible Edibles Bakery

Bakery · Long Island City

LIC stalwart with a dedicated gluten‑free, vegan kitchen inside The Factory Building. Carrot‑walnut muffins, raspberry‑hazelnut bars, and brownies anchor a community‑minded cafe with retail hours and wholesale roots.

https://sensibleedibles.com/

Posh Pop Bakeshop

Bakery · Greenwich Village

Maximalist gluten‑free sweets in a candy‑colored shop—towering cheesecakes, cookie pies, and cinnamon rolls. Spotlighted by amNewYork. Portions are generous; grab‑and‑go works best during busy evenings.

https://www.amny.com/news/posh-pop-bakeshop-on-bleecker-is-gluten-free-but-doesnt-sacrifice-taste-2/
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3x3 Kitchen

Bakery · Riverdale

Family‑run, celiac‑safe Bronx bakery led by a Culinary Institute of America–trained chef. Acclaimed sourdough, babka, and seasonal pastries draw fans citywide; check market pop‑ups and rotating flavors.

https://3x3kitchen.com/store-location/

TAP NYC | 100% Gluten-Free Sandwiches & Açaí Bowls | Upper West Side

Sandwich shop · Upper West Side

Brazilian‑owned, 100% gluten‑free cafe for tapioca sandwiches and pão de queijo, plus açaí bowls. A lively, affordable breakfast or snack near the museum circuit; fast‑casual and friendly.

https://www.eattap.co/home
View this post on Instagram
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Gluten-Free Bakery in New York

8 Places
A handpicked mix of dedicated gluten-free bakeries—iconic hits and fresh finds—verified as open and locally rooted. From bagels to Japanese sandos and vegan bakes, this list spans neighborhoods and flavors. Go early; favorites sell out.
Modern Bread and Bagel
Bakery

Hand‑rolled, kettle‑boiled, entirely gluten‑free bagels with a bakery case of babka, cookies, and rugelach. Featured by New York Jewish Week and praised by bagel obsessives. Weekend lines form fast—order ahead or arrive early.

By the Way Bakery
Bakery

Beloved neighborhood bakery turning out rugelach, challah, biscotti, and elegant layer cakes—gluten‑free and dairy‑free. Included by Eater New York among notable Jewish bakeries. Small shop, big flavors; Friday challah sells fast.

Senza Gluten by Jemiko - 100% Gluten Free Cafe & Bakery
Cafe

The bakery arm of the long‑running gluten‑free restaurant: éclairs, tiramisu, breads, and espresso in a compact café. Consistently loved by celiac diners and a perfect pre‑ or post‑meal stop near its sibling restaurant.

Sixteen Mill Bakeshop
Bakery

Gowanus bakery specializing in vegan, gluten‑free, refined‑sugar‑free bakes—babka muffins, savory scones, excellent sourdough. Recognized by Condé Nast Traveler among NYC’s best bakeries. Go early; the case empties quickly.

Sensible Edibles Bakery
Bakery

LIC stalwart with a dedicated gluten‑free, vegan kitchen inside The Factory Building. Carrot‑walnut muffins, raspberry‑hazelnut bars, and brownies anchor a community‑minded cafe with retail hours and wholesale roots.

Posh Pop Bakeshop
Bakery

Maximalist gluten‑free sweets in a candy‑colored shop—towering cheesecakes, cookie pies, and cinnamon rolls. Spotlighted by amNewYork. Portions are generous; grab‑and‑go works best during busy evenings.

3x3 Kitchen
Bakery

Family‑run, celiac‑safe Bronx bakery led by a Culinary Institute of America–trained chef. Acclaimed sourdough, babka, and seasonal pastries draw fans citywide; check market pop‑ups and rotating flavors.

TAP NYC | 100% Gluten-Free Sandwiches & Açaí Bowls | Upper West Side
Sandwich shop

Brazilian‑owned, 100% gluten‑free cafe for tapioca sandwiches and pão de queijo, plus açaí bowls. A lively, affordable breakfast or snack near the museum circuit; fast‑casual and friendly.

A handpicked mix of dedicated gluten-free bakeries—iconic hits and fresh finds—verified as open and locally rooted. From bagels to Japanese sandos and vegan bakes, this list spans neighborhoods and flavors. Go early; favorites sell out.

Modern Bread and Bagel

Bakery · Upper West Side

Hand‑rolled, kettle‑boiled, entirely gluten‑free bagels with a bakery case of babka, cookies, and rugelach. Featured by New York Jewish Week and praised by bagel obsessives. Weekend lines form fast—order ahead or arrive early.

https://www.modernbreadandbagel.com/
View this post on Instagram

By the Way Bakery

Bakery · Upper East Side

Beloved neighborhood bakery turning out rugelach, challah, biscotti, and elegant layer cakes—gluten‑free and dairy‑free. Included by Eater New York among notable Jewish bakeries. Small shop, big flavors; Friday challah sells fast.

https://ny.eater.com/maps/best-babka-rugelach-jewish-bakeries-nyc

Senza Gluten by Jemiko - 100% Gluten Free Cafe & Bakery

Cafe · Greenwich Village

The bakery arm of the long‑running gluten‑free restaurant: éclairs, tiramisu, breads, and espresso in a compact café. Consistently loved by celiac diners and a perfect pre‑ or post‑meal stop near its sibling restaurant.

https://senzaglutenbyjemiko.com/

Sixteen Mill Bakeshop

Bakery · Gowanus

Gowanus bakery specializing in vegan, gluten‑free, refined‑sugar‑free bakes—babka muffins, savory scones, excellent sourdough. Recognized by Condé Nast Traveler among NYC’s best bakeries. Go early; the case empties quickly.

https://www.cntraveler.com/story/best-bakeries-nyc

Sensible Edibles Bakery

Bakery · Long Island City

LIC stalwart with a dedicated gluten‑free, vegan kitchen inside The Factory Building. Carrot‑walnut muffins, raspberry‑hazelnut bars, and brownies anchor a community‑minded cafe with retail hours and wholesale roots.

https://sensibleedibles.com/

Posh Pop Bakeshop

Bakery · Greenwich Village

Maximalist gluten‑free sweets in a candy‑colored shop—towering cheesecakes, cookie pies, and cinnamon rolls. Spotlighted by amNewYork. Portions are generous; grab‑and‑go works best during busy evenings.

https://www.amny.com/news/posh-pop-bakeshop-on-bleecker-is-gluten-free-but-doesnt-sacrifice-taste-2/
View this post on Instagram

3x3 Kitchen

Bakery · Riverdale

Family‑run, celiac‑safe Bronx bakery led by a Culinary Institute of America–trained chef. Acclaimed sourdough, babka, and seasonal pastries draw fans citywide; check market pop‑ups and rotating flavors.

https://3x3kitchen.com/store-location/

TAP NYC | 100% Gluten-Free Sandwiches & Açaí Bowls | Upper West Side

Sandwich shop · Upper West Side

Brazilian‑owned, 100% gluten‑free cafe for tapioca sandwiches and pão de queijo, plus açaí bowls. A lively, affordable breakfast or snack near the museum circuit; fast‑casual and friendly.

https://www.eattap.co/home
View this post on Instagram