Gluten-Free Bakery in San Diego (2025)
Starry Lane Bakery
Bakery · San Diego
A Hillcrest favorite where everything is free of the top 10 allergens, Starry Lane draws devoted locals for sandwich rolls, cakes, cinnamon buns, and excellent breads. Recognized by AllergyEats and highlighted by local press, it’s a celiac-safe cornerstone.
Phatties Bake Shop
Bakery · San Diego
Playful Ocean Beach bake shop leaning fully gluten-free and largely vegan. Featured by the San Diego Union-Tribune and praised by San Diego Magazine, it turns out nostalgic cakes, doughnuts, pies, and coffee cake with plenty of personality.
Chani's Donuts (Shaw-nees)
Doughnut Shop · San Diego
A circus-bright, dedicated gluten-free and allergen-friendly mini-donut shop in Kearny Mesa. San Diego Magazine spotlights its rotating glaze lineup—from apple pie to churro—fried fresh and safe for strict diets.
Paleo Treats
Dessert shop · San Diego
Veteran- and woman-owned Normal Heights staple for gluten-free, grain-free sweets like the Bandito and Brownie Bomb. Frequently recommended by San Diego Magazine, it’s a reliable stop for clean-ingredient desserts and takeaway goodies.
Healthy Creations Cafe
Organic restaurant · Encinitas
North County’s 100% gluten-free café-bakery bakes daily breads, English muffins, pastries, and quiche from a dedicated facility. Loved by the celiac community, it also supplies sister spots with breads from its bakehouse.
Nectarine Grove
Health food restaurant · Encinitas
A 100% gluten-free café and bake case with croissants, cinnamon rolls, and breakfast pastries alongside savory plates. The brand’s emphasis on organic sourcing and dedicated protocols makes it a go-to for strict gluten-free diners.
Nectarine Grove Cafe & Bakehouse
Bakery · San Diego
The Del Mar bakehouse for this independent, fully gluten-free group showcases laminated pastries, croissants, donuts, and quiche. Consistently praised by gluten-free reviewers for variety and meticulous handling.
Peace Pies
Vegan restaurant · San Diego
Beloved for raw, vegan, and gluten-free sweets—think cheezecakes and seasonal pies—this Ocean Beach institution stays central to San Diego’s plant-based scene. The brand’s recent accolades and steady hours make it an easy dessert stop.
Peace Pies
Vegan restaurant · Encinitas
Back in North County with daily hours, Peace Pies’ Encinitas cafe mirrors OB’s menu of raw, gluten-free desserts and sweets. Its community-driven reopening underscores deep local roots and loyal gluten-free fans.
Coco & Jules Cookies
Bakery · San Diego
A Normal Heights bakery devoted to gluten-free and nut-free cookies, cupcakes, and rotating specials. Covered by neighborhood news and applauded by local gluten-free groups, it’s a sweet stop after dinner on Adams Avenue.
Plantiful Kitchen
Bakery · Carlsbad
Small-batch Carlsbad bakery making gluten-free, plant-based, and refined-sugar-free breads, bagels, donuts, and cakes. Noted by local wellness media, it’s a thoughtful pick for clean-ingredient treats and preorders.